Research Scientist Resume

EMPLOYMENT:

Research Scientist

Confidential

Responsibilities:

Duties include development of computational tools and performing bioinformatics analysis using high - throughput sequencing data.
Design and manage multiple research projects ranging from pathogen detection, gene expression, and metagenomics analysis for clinical and environmental samples.
Work directly with MD and MD-PhD collaborators to ensure the completion of analysis deliverables with high quality and in a timely manner.
Write papers, deliver scientific presentations perform training and supervising lab personnel.
Develop and maintain highly effective, cooperative relationships with PIs and other collaborators.

Research Assistant Professor

Confidential

Responsibilities:

Duties include grant writing, managing research projects, review potential papers written by graduate students and members of the center.
Participate as guest lecturer in selected course related to Bioinformatics in the Department of Computer Science and Department of Engineering Technology.
Lead the development of application and computational analysis pipelines.

Sr. Technical Researcher / Project Manager

Confidential

Responsibilities:

Evaluated third-party bioinformatics tools used to analyze next-generation sequencing data, performed extensive research in computational approaches to detect pathogens in the presence of complex hosts (i.e., environmental samples, human)
Developed data analysis applications and pipelines for various research projects in such areas as cancer genomics and metagenomics, designed novel algorithms and data structures for both standard Windows and Confidential Linux based environments to quickly and accurately identify target signatures for the design of Confidential assays
Trained technical and non-technical collaborators and licensed users to run the developed analysis pipelines in both a one-on-one and large group setting.
Majority of the development was done using C++ with additional use of scripting languages (Perl, Python, etc.) to integrate with other third-party bioinformatics tools.

Bioinformatics Researcher

Confidential

Responsibilities:

Developed data analysis applications / pipelines in C++ for Confidential to be used in various research projects in both Windows and Linux based environments.
Maintained departments’ extensive data collection generated from in-house sequencing technologies and collected from third-party resources such as Confidential and multiple collaborations.
Conducted research to best analyze next-generation sequencing results of various genomic material in such areas as metagenomics and pathogen detection.
Performed the duties of a project manager including the hiring of additional developers and distributing workload among employees.

Data Manager

Confidential

Responsibilities:

Managed departments’ extensive data collection consisting of in-house sequenced data and data collected from third-party resources such as Confidential ; administered the Illumina Pipelines from installation of software to analysis and post-analysis of sequenced results.
Developed various scripts to easily query, analyze, and distribute the sequenced data to department PI’s and collaborators.
Use MS Visual Studio C++ to develop data analysis applications for various research projects and work in both Windows and Confidential Linux based environments.
Trained technical and non-technical collaborators and licensed users to run developed analysis pipelines in both a one-on-one and large group setting.

Programmer Intern

Confidential

Responsibilities:

Created and maintained a Relational Database using MySQL in a Linux environment.
Constructed new scripts and modified existing ones in order to streamline functions and database queries.